Showing posts with label weird computers. Show all posts
Showing posts with label weird computers. Show all posts

Wednesday, July 10, 2024

Everything Is A Computer If You Try Hard Enough


You walk into a room, and it's empty, but you enter, and without hesitation, you sit down into mid air, and before you land, a chair materializes itself to catch you. The actual matter, the particles that make up the chair, have been engineered to become chairs. They have "chair" written not into their DNA, but into their fundamental physics. They have no power source because they take their energy from light waves, sound waves, vibrations, even gradients like in between high temperatures and lows, or saltwater and fresh, or whatever that means, since it could be an information gradient (could it?). They have no battery because they don't use more than they need in real time. Every particle of this special form of matter is a computer, with wireless communication, with sensors, all of it built into the physics of the particles themselves. It will know you're in the room, who you are and what you want. And that's why all you have to do is want to sit, and the chair materializes. It's still too hard to explain what it means when everything is a computer, but here is an introduction:  

Photonic chip that 'fits together like Lego' opens door to semiconductor industry
Dec 2023, phys.org

Chiplets - The chip is built using an emerging technology in silicon photonics that allows the integration of diverse systems on semiconductors less than 5 millimeters wide; it's like fitting together Lego building blocks, where new materials are integrated through advanced packaging of components, using electronic "chiplets."

via University of Sydney Nano Institute:  Matthew Garrett et al, Integrated microwave photonic notch filter using a heterogeneously integrated Brillouin and active-silicon photonic circuit, Nature Communications (2023). DOI: 10.1038/s41467-023-43404-x

Unexpected AI fingers image credit: AI Art - AI Fingers at Work on a Circuitboard - 2023


Study suggests that physical processes can have hidden neural network-like abilities
Jan 2024, phys.org

Natural molecular processes can do complex calculations that rival a simple neural network. On the face of it, the initial steps in the act of freezing - called 'nucleation' in physics - do not resemble 'thinking'. But the new study shows that the act of freezing can "recognize" subtly different chemical combinations - e.g., the smell of oatmeal raisin cookies versus chocolate chip - and build different molecular structures in response.

The work points at a new view of computation that does not involve designing circuits, but rather designing what physicists call a phase diagram. For example, for water, a phase diagram might describe the temperature and pressure conditions in which liquid water will freeze or boil, which are 'muscle'-like material properties. But this work shows that the phase diagram can also encode 'thinking' in addition to 'doing,' when scaled up to complex systems with many different kinds of components.

via University of Chicago, California Institute of Technology, and Maynooth University: Constantine Glen Evans et al, Pattern recognition in the nucleation kinetics of non-equilibrium self-assembly, Nature (2024). DOI: 10.1038/s41586-023-06890-z

 
International research team develops new hardware for neuromorphic computing
Feb 2024, phys.org

In the eye, the visual information is pre-processed by hundreds of millions of the retina's photoreceptors and converted into electrical signals that are transmitted by the optic nerve to the brain. This process greatly reduces the amount of data processed in the brain by the visual cortex.

(The nose is far, far crazier in what it does, by the way)

Inspired by eyesight, this on-chip phonon-magnon reservoir for neuromorphic computing maps input signals into a multidimensional reservoir space. The reservoir is made of acoustic waves (phonons) and spin waves (magnons), and is not trained but only expedites recognition by a simplified artificial neural network, resulting in enormous reduction of computational resources and training time.

(Wait until they get inspired by the nose)

via Technische Universität Dortmund, Loughborough University, V. E. Lashkaryov Institute of Semiconductor Physics in Kyiv, University of Nottingham: Dmytro D. Yaremkevich et al, On-chip phonon-magnon reservoir for neuromorphic computing, Nature Communications (2023). DOI: 10.1038/s41467-023-43891-y


A low-cost system to collect EEG measurements during VR experiences
Feb 2024, phys.org

Everything gets it's own chip, just like this

NeuroVista, the new system proposed by the researchers, utilizes KS1092, a cost-effective biological potential measurement chip. The prototype of the device created by the researchers is comprised of this chip, along with a set of electrodes, and a lithium battery.

via South China University of Technology: Zhiyuan Yu et al, A low-cost, wireless, 4-channel EEG measurement system used in virtual reality environments, HardwareX (2024). DOI: 10.1016/j.ohx.2024.e00507.
 

Giant leap toward neuromorphic devices: High-performance spin-wave reservoir computing
Mar 2024, phys.org

It's a high-performance spin wave reservoir computing that uses spintronics. It works with a randomly generated network called the "reservoir" which enables the memorization of past input information and its nonlinear transformation, allowing physical systems to perform tasks for sequential data.

via Tohoku University Advanced Institute for Materials Research: Satoshi Iihama et al, Universal scaling between wave speed and size enables nanoscale high-performance reservoir computing based on propagating spin-waves, npj Spintronics (2024). DOI: 10.1038/s44306-024-00008-5

Wednesday, January 10, 2024

Biocomputers and Engineered Living Material


Using mycelium to create a self-healing wearable leather-like material
Apr 2023, phys.org

Mushroom leather made of mycelium mats

via Newcastle and Northumbria Universities: Elise Elsacker et al, Fungal Engineered Living Materials: The Viability of Pure Mycelium Materials with Self‐Healing Functionalities, Advanced Functional Materials (2023). DOI: 10.1002/adfm.202301875



New biocomputing method uses enzymes as catalysts for DNA-based molecular computing
May 2023, phys.org

Traditional computer hardware is limited in its ability to interface with living organs, which has constrained the development of medical devices. Through the use of biological molecules such as DNA or proteins, biocomputing has the potential to overcome these limitations.

Biocomputing is typically done either with live cells or with non-living, enzyme-free molecules. This team has developed a platform for a third method of biocomputing: Trumpet, or Transcriptional RNA Universal Multi-Purpose GatE PlaTform.

"Trumpet is a non-living molecular platform, so we don't have most of the problems of live cell engineering. We don't have to overcome evolutionary limitations against forcing cells to do things they don't want to do."

via University of Minnesota: Judee A. Sharon et al, Trumpet is an operating system for simple and robust cell-free biocomputing, Nature Communications (2023). DOI: 10.1038/s41467-023-37752-x


Scientists make common pain killers from pine trees instead of crude oil
Jul 2023, phys.org

Using the "biorefinery" approach, the precursors for paracetamol and ibuprofen, as well as beta-blockers and an asthma inhaler drug, as well as other chemicals for perfumes and cleaning products have all been made from biorenewable β-pinene, a component of turpentine and by-product from the paper industry. (Because using oil to make pharmaceuticals is unsustainable.)

via University of Bath: Joshua Dale Tibbetts et al, Sustainable Syntheses of Paracetamol and Ibuprofen from Biorenewable β‐pinene, ChemSusChem (2023). DOI: 10.1002/cssc.202300670

AI Art - Bioalchemy Neural Net 2 - 2023

3D-printed 'living material' could clean up contaminated water
Sep 2023, phys.org

"Engineered living material" - 3D-printed structure made of a seaweed-based polymer called alginate and bacteria that have been genetically engineered to produce an enzyme that transforms various organic pollutants into benign molecules. The bacteria were also engineered to self-destruct in the presence of a molecule called theophylline, which is often found in tea and chocolate. "What's innovative is the pairing of a polymer material with a biological system to create a living material."

via University of California San Diego Materials Research Science and Engineering Center: Debika Datta et al, Phenotypically complex living materials containing engineered cyanobacteria, Nature Communications (2023). DOI: 10.1038/s41467-023-40265-2


Metal-loving microbes offer a green way to refine rare earth elements
Oct 2023, phys.org

Cornell scientists have characterized the genome of Shewanella oneidensis - a metal-loving bacteria with an affinity for rare earth elements - to replace the harsh chemical processing with a benign practice called biosorption.

via Cornell: Sean Medin et al, Genomic characterization of rare earth binding by Shewanella oneidensis, Scientific Reports (2023). DOI: 10.1038/s41598-023-42742-6


New pipeline makes valuable organic acid from plants—saving money and emissions
Oct 2023, phys.org

They're making succinic acid from sugarcane using Issatchenkia orientalis, a yeast like Saccharomyces cerevisiae or the bacteria Escherichia coli, but one that thrives in pH 3-4 acidic conditions. This means it doesn't produce unwanted by-products that need to be separated-out at high cost. 

The researchers did extensive metabolic engineering to rewire I. orientalis to produce robust levels of succinic acid, which is widely used additive for food and beverages.

via University of Illinois at Urbana-Champaign Center for Advanced Bioenergy and Bioproducts Innovation, and Princeton: Vinh G. Tran et al, An end-to-end pipeline for succinic acid production at an industrially relevant scale using Issatchenkia orientalis, Nature Communications (2023). DOI: 10.1038/s41467-023-41616-9

AI Art - Bioalchemy Neural Net 3 - 2023

Scientists report completion of chromosome XI, a major step towards creating the world's first synthetic yeast
Nov 2023, phys.org

World's first synthetic yeast genome -- The synthetic chromosome has replaced one of the natural chromosomes of a yeast cell and, after a painstaking debugging process, now allows the cell to grow with the same fitness level as a natural cell. The synthetic genome will not only help scientists to understand how genomes function, but it will have many applications. 
 
via University of Nottingham and Imperial College London: Synthetic yeast chromosome XI design provides a testbed for the study of extrachromosomal circular DNA dynamics, Cell Genomics (2023). DOI: 10.1016/j.xgen.2023.100418.


Charged 'molecular beasts' as the foundation for new chemical compounds
Nov 2023, phys.org

They are modifying mass spectrometers to synthesize new molecules.

Note that a mass spectrometer is supposed to break things apart so you can look at them one by one, but this is now making entirely new chemicals with parts of the broken molecules. 

The basic strategy of controlling reactive chemicals in mass spectrometers is not new, but the  substances are only produced in tiny quantities and cannot be extracted. They are destroyed when the signal used for analyses is generated. 

They're doing "preparative mass spectrometry" and making new molecules. 

via Physical and Theoretical Chemistry at Leipzig University: Markus Rohdenburg et al, Chemical Synthesis with Gaseous Molecular Ions: Harvesting [B12Br11N2]− from a Mass Spectrometer, Angewandte Chemie International Edition (2023). DOI: 10.1002/anie.202308600


New antibiotic approach proves promising against Lyme bacterium
Nov 2023, phys.org

Change some of the words, or not even, and it sounds like the most diabolical scifi weapon scenario:

"This transport mechanism gets internalized in the bacterium and brings in a molecule that causes what we've described as a berserker reaction - a programmed death response," said lead author Timothy Haystead, Ph.D., professor in Duke's Department of Pharmacology and Cancer Biology. "It wipes out the bacteria - sterilizes the culture with a single dose of light. And then when you look at what occurs with electron microscopy, you see the collapse of the chromosome."

via Duke University Medical Center: Dave L. Carlson et al, Targeting Borrelia burgdorferi HtpG with a berserker molecule, a strategy for anti-microbial development, Cell Chemical Biology (2023). DOI: 10.1016/j.chembiol.2023.10.004

Monday, March 13, 2023

Of Course Biocomputers Are Real, They're Us


I always thought mass social behavioral modification would be via olfactory receptor manipulation, but this looks like another option:

Controlling nematode worm behavior using two different light-sensitive proteins called opsins*
Nov 2022, phys.org

So they are "introducing" new sensory cells into the C. elegans. They find light-sensitive cells (opsins) in other animals, and put them in the worms.

One opsin is sensitive to white light and comes from a mosquito, another is sensitive to ultraviolet light and comes from a lamprey. These "tuned" light-receptor cells are then introduced to parts of the worm's motor neurons.

When you shine light on the worm, it stimulates the motor neurons, making them move. They made the white-light opsins to make the worm go, and the UV light makes it stop.

They can then move the worm, or rather make the worm move itself, by shining light on it. Fuck off.

*Opsins, like olfactory receptros, are GPCR's -- G protein-coupled receptors

via Graduate School of Human Life and Ecology at Osaka Metropolitan University: Mitsumasa Koyanagi et al, High-performance optical control of GPCR signaling by bistable animal opsins MosOpn3 and LamPP in a molecular property–dependent manner, Proceedings of the National Academy of Sciences (2022). DOI: 10.1073/pnas.2204341119


Scientists create living smartwatch powered by slime mold
Dec 2022, phys.org

Using the electrically conductive single-cell organism known as "slime mold," the researchers created a watch that only works when the organism is healthy, requiring the user to provide it with food and care.

The organism (Physarum polycephalum or slime mold) is placed in an enclosure on the watch, and the user must regularly feed it a mixture of water and oats to induce its growth. When the slime mold reaches the other side of the enclosure, it forms an electrical circuit that activates the heart rate monitor function. The organism can also enter a dormant state when not fed, allowing for revival days, months, or even years later.

The researchers found a high level of attachment to the watch, with some users saying it felt like a pet -- even naming it, or putting their partner in charge of the feeding when they got sick.

via University of Chicago: Jasmine Lu et al, Integrating Living Organisms in Devices to Implement Care-based Interactions, The 35th Annual ACM Symposium on User Interface Software and Technology (2022). DOI: 10.1145/3526113.3545629

Image credit: It's not C elegans but it is a nematode (P pacificus) showing us its teeth. Because it has teeth. Everyday Nightmare Pictures - Nematode Teeth - P pacificus nematode showing its teeth - Jürgen Berger MPI for Biology - 2022

Thursday, September 22, 2022

The Weird Computer Revolution


Materials science is moving beyond the "perimeter of ignorance" faster than we can keep up with it. And definitely faster than architects, civil engineers, industrial designers, etc. can keep up with it. Materials scientists, and even computer scientists in overlapping fields, are finding lots of "completely unexpected" things that defy our understanding of how matter behaves. 

Combine that with the "weird computer" revolution that happens when the matter itself becomes programmable, and the future gets hard to imagine. (Maybe less hard to imagine is the resulting human health and ecological disasters that will happen, kind of like how the industrial revolution created climate change).

A world where every molecule is itself a computer - The farthest I can get when thinking about this is Stanislav Lem's Solaris (1961) where the planet itself was not only alive but conscious, and trying to communicate with humans.



Shape-shifting worm blob model could inspire future robot swarms
Oct 2021, phys.org

'Entangled active matter collectives' are a hot topic in robotics and materials science...

via Georgia Tech: Chantal Nguyen et al, Emergent Collective Locomotion in an Active Polymer Model of Entangled Worm Blobs, Frontiers in Physics (2021). DOI: 10.3389/fphy.2021.734499


Physicists make square droplets and liquid lattices
Sep 2021, phys.org

Completely unexpected:

In their work, the team used combinations of oils with different dielectric constants and conductivities, then subjected the liquids to an electric field.

As well as being disrupted by the electric field, the liquids were confined into a thin, nearly two-dimensional sheet. This combination led to the oils reshaping into various completely unexpected droplets and patterns.

The droplets in the experiment could be made into squares and hexagons with straight sides, which is almost impossible in nature, where small bubbles and droplets tend to form spheres. The two liquids could be also made to form into interconnected lattices: grid patterns that occur regularly in solid materials but are unheard of in liquid mixtures. 

via Aalto University Department of Applied Physics in the Active Matter: Diversity of non-equilibrium patterns and emergence of activity in confined electrohydrodynamically driven liquids, Science Advances (2021). DOI: 10.1126/sciadv.abh1642


The next generation of robots will be shape-shifters
Mar 2022, phys.org

It is hoped that active matter will lead to a new generation of machines whose function will come from the bottom up. So, instead of being governed by a central controller (the way today's robotic arms are controlled in factories), these new machines would be made from many individual active units that cooperate to determine the machine's movement and function. This is akin to the workings of our own biological tissues, such as the fibers in heart muscle.

via University of Bath: Jack Binysh et al, Active elastocapillarity in soft solids with negative surface tension, Science Advances (2022). DOI: 10.1126/sciadv.abk3079


Self-sensing artificial muscle based on liquid crystal elastomer and low-melting point alloys
May 2022, phys.org

Inspired by the coupled behavior of muscles, bones, and nerve systems of mammals and other living organisms to create a multifunctional artificial muscle in the lab.

via Frontier Institute of Science and Technology, Jiaotong University, China: Haoran Liu et al, Shape-programmable, deformation-locking, and self-sensing artificial muscle based on liquid crystal elastomer and low–melting point alloy, Science Advances (2022). DOI: 10.1126/sciadv.abn5722


Ancient art of kirigami meets AI for better materials design
Apr 2022. phys.org

via Argonne National Laboratory: Pankaj Rajak et al, Autonomous reinforcement learning agent for stretchable kirigami design of 2D materials, npj Computational Materials (2021). DOI: 10.1038/s41524-021-00572-y

And: Pankaj Rajak et al, Autonomous reinforcement learning agent for chemical vapor deposition synthesis of quantum materials, npj Computational Materials (2021). DOI: 10.1038/s41524-021-00535-3


A new approach to tackle optimization problems using Boltzmann machines
Apr 2022, phys.org

"Optimization problem" is codeword for 1. slime mold computers, 2. quantum computers, and 3. weird computers in general, like crystals, dust, liquid photons, BECs, you name it, and because the optimization problem, also known as the traveling salesman problem, and which is related to random walks, or the drunkard's walk, is a type of problem that classical computers are really bad at, but quantum computers, slime mold, etc are really good at. 

Restricted Boltzmann machines (RBMs) are generative neural networks. They speak the language of big data and show you the patterns in it. 

RBMs rely on binary activations, circumventing the direct matrix-vector multiplications that are typically the most computationally demanding for deep learning networks. 

"Our algorithm functions by using the basic principles of digital logic in a new way," Patel explained. "Usually, digital gates only function in the forward direction, but by using probabilistic graphical models and machine learning, we have shown ways of operating them in reverse
Using this principle, we design our probabilistic digital circuits in a way that can solve the forward problem ("Is this set of inputs a valid solution?" or "What is 191 x 223?"), but because the system is reversible, it can also answer the much harder reverse problem ("What are all the sets of inputs that produce a valid solution?" and "What are A and B such that A x B = 42593?" )."

via University of California Berkeley: Saavan Patel et al, Logically synthesized and hardware-accelerated restricted Boltzmann machines for combinatorial optimization and integer factorization, Nature Electronics (2022). DOI: 10.1038/s41928-022-00714-0


A new age of 2.5D materials
May 2022, phys.org

Scientists are exploring new ways to artificially stack two-dimensional (2D) materials, introducing so-called 2.5D materials with unique physical properties. 

They're made using chemical vapor deposition, and they're made out of graphene, hexagonal boron nitride, and transition metal dichalcogenides.

via Kyushu University: Hiroki Ago et al, Science of 2.5 dimensional materials: paradigm shift of materials science toward future social innovation, Science and Technology of Advanced Materials (2022). DOI: 10.1080/14686996.2022.2062576


Mathematicians suggest liquid crystals could be used to create building blocks for a new kind of computer
Aug 2022, phys.org

The orientations of LCD molecules could be manipulated using an electric field and perform calculations similar to the way they are done with standard logic gates. The researchers note that, in their approach, calculations would appear as ripples moving through the crystal.

via MIT: Žiga Kos et al, Nematic bits and universal logic gates, Science Advances (2022). DOI: 10.1126/sciadv.abp8371


New programmable materials can sense their own movements
Aug 2022, phys.org

"Sensorizing structures"

Method for 3D printing materials with tunable mechanical properties from incorporated networks of air-filled channels, and which can sense how they are moving and interacting with the environment. 

Also "architected materials" have customizable mechanical properties based solely on its geometry.

via MIT: Fluidic innervation sensorizes structures from a single build material, Science Advances (2022). science.org/doi/10.1126/sciadv.abq4385


Researchers engineer novel material capable of 'thinking'
Aug 2022, phys.org

"We discovered how to use mathematics and kinematics in mechanical-electrical networks." 

The researchers were stuck, until they rediscovered a 1938 paper published by Claude E. Shannon, who described a way to create an integrated circuit by constructing mechanical-electrical switching networks that follow the laws of Boolean mathematics.

The material is made from conductive and non-conductive rubber materials that sense and react to how forces are applied to them.

via Pennsylvania State University: Ryan Harne, Mechanical integrated circuit materials, Nature (2022). DOI: 10.1038/s41586-022-05004-5.

Monday, September 12, 2022

Poor Man's Qubit


Physics-inspired graph neural networks to solve combinatorial optimization problems
May 2022, phys.org

Uses graph neural networks (GNNs) to tackle combinatorial optimization problems.

"Given their inherent scalability, physics-inspired GNNs can be used today to approximately solve (large-scale) combinatorial optimization problems with quantum-native models, while helping our customers get quantum-ready by using the mathematical representation that quantum devices understand," Brubaker said.

Solves optimization problems without the need for training labels.

Caveat: Brought to you by Amazon - "Our work was very much inspired by customer needs"

On the topic of optimization problems and quantum computing, it's getting easier to understand (since every other article is on this topic) that quantum computers will be good at optimization, but the key word is "will". And so for now, we're figuring out how to do optimization problems using regular computers, but in a funny way they sort of weren't meant ot be used, but which becam ereally uselful with the advent of big data. And that half-way of using regular computers like quantum computers is to use the graphics processors in parallel to create neural nets. 

via Amazon Quantum Solutions Lab: Martin J. A. Schuetz et al, Combinatorial optimization with physics-inspired graph neural networks, Nature Machine Intelligence (2022). DOI: 10.1038/s42256-022-00468-6

Image credit: Gyroid for manipulating light into topological states, Nik Spencer for Nature, 2017 [link]


The potential of p-computers
Jun 2022, phys.org

Probablistic computers, P-computers, are powered by probabilistic bits (p-bits), which interact with other p-bits in the same system. Unlike the bits in classical computers, which are in a 0 or a 1 state, or qubits, which can be in more than one state at a time, p-bits fluctuate between positions and operate at room temperature.

Camsari describes the Ising machine (sIm) as a collection of probabilistic bits which can be thought of as people. "The people can make decisions quickly because they each have a small set of trusted friends and they do not have to hear from everyone in an entire network," he explained. 

The researchers showed that their sparse architecture in field-programmable gate arrays was up to six orders of magnitude faster and had increased sampling speed five to eighteen times faster than those achieved by optimized algorithms used on classical computers.

via University of California Santa Barbara Institute for Energy Efficiency: Navid Anjum Aadit et al, Massively parallel probabilistic computing with sparse Ising machines, Nature Electronics (2022). DOI: 10.1038/s41928-022-00774-2


Also this:
'Poor man's qubit' can solve quantum problems without going quantum

Tuesday, September 6, 2022

Imitation is the Sincerest Form of Flattery


Moth wing–inspired sound absorbing wallpaper in sight after breakthrough
Jun 2022, phys.org

Moth wing as a natural occurring acoustic absorbing metasurface.

via University of Bristol: Moth wings as sound absorber metasurface, Proceedings of the Royal Society A: Mathematical and Physical Sciences (2022). DOI: 10.1098/rspa.2022.0046


Dynamic building facades inspired by marine organisms could reduce heating, cooling and lighting costs
Jul 2022, phys.org

Optofluidic cells:
The prototype optofluidic cells consist of a layer of mineral oil approximately one millimeter thick, sandwiched between two transparent sheets of plastic. Through a tube connected to the center of the cell, the researchers can inject a small amount of water containing a pigment or dye that creates a bloom of color controlled via a digital pump that runs in both directions.

"I don't think it's stretching the analogy too much to see buildings as living organisms. They have a metabolism, in terms of inward and outward energy flow. And they must respond to changing environmental conditions to maintain a comfortable and well-functioning interior."

via University of Toronto: Raphael Kay et al, Decapod-inspired pigment modulation for active building facades, Nature Communications (2022). DOI: 10.1038/s41467-022-31527-6


Artificial cilia could someday power diagnostic devices
May 2022, phys.org

As a bonus, the team created a cilia device that is equipped with a complementary metal-oxide-semiconductor (CMOS) clock circuit—essentially an electronic "brain" that allows the cilia to operate without being tethered to a conventional computer system. That opens the door to developing a host of low-cost diagnostic tests that could be performed in the field.

via Cornell: Wei Wang et al, Cilia metasurfaces for electronically programmable microfluidic manipulation, Nature (2022). DOI: 10.1038/s41586-022-04645-w


Operating a 'smart home' by breath control
Jul 2022, phys.org

For users who can't speak or use their limbs to program a device, smart technology's benefits are nearly impossible to access. Cao and his collaborators used a technology known as triboelectric nanogenerators (TENGs), or triboelectrification, to make the "breathing-driven Human-Machine Interface (HMI) system".

via Case Western Reserve University: Yaokun Pang et al, Self‐Powered Multifunctional Human–Machine Interfaces for Respiratory Monitoring and Smart System Control, Advanced Materials Interfaces (2022). DOI: 10.1002/admi.202201202

Also: Dong Wook Kim et al, Material aspects of triboelectric energy generation and sensors, NPG Asia Materials (2020). DOI: 10.1038/s41427-019-0176-0


Monday, March 14, 2022

Programmable Matter and Ubiquitous Intelligence


Intelligence is going to be embedded in everything -- smart clothes, smart furniture, smart air.

I still think of a computer as a piece of hardware, a metal box with "electronics" inside. But if you told me that a cup of water could also be a computer, I'd have a hard time imagining that. It's one of those paradigm shifts that separates us from the future. Like if you just discovered fire, but then someone tells you there's another way to "cook" food in the slow fire of fermentation.

You would realize that food is cooking all the time, without our intervention. We just learned how to control it. 

If I try to imagine that a river can be a computer, it's hard. You mean the weather itself can be a computer that we can then use to forecast the weather? Yes, something like that, but not really (Gödel might want a word). 

Image credit: Efoia via Fractal Forums - Pseudo-kleinian folded with sphere inversion rendered in Oak Fractal Sandbox with Monte Carlo path tracing - 2017 [link]


How simple liquids like water can perform complex calculations
Jan 2022, phys.org

Reservoir computing is a relatively recent idea in computing. Instead of traditional binary programs run on semiconductor chips, the reactions of a nonlinear dynamical system—the reservoir—are used to perform much of the calculation. Various nonlinear dynamical systems from quantum processes to optical laser components have been considered as reservoirs.

"It turns out that deionized water is best for solving second-order nonlinear problems." The good performance of these solutions demonstrates their potential for more complicated tasks, such as handwriting font recognition, isolated word recognition, and other classification tasks", says Professor Akai-Kasaya.


I'm having visions of Stanislaw Lem's Solaris (1961), which featured an extra-terrestial intelligent terrestrial, aka a planetary superorganism. Considering that Lem intended to explore "the limitations of human rationality", I imagine he would enjoy seeing this branch of science develop.

via Osaka University: Shaohua Kan et al, Physical Implementation of Reservoir Computing through Electrochemical Reaction, Advanced Science (2021). DOI: 10.1002/advs.202104076


Researchers find a single-celled slime mold with no nervous system that remembers food locations
Feb 2021, phys.org

The researchers discovered that the organism weaves memories of food encounters directly into the architecture of the network-like body and uses the stored information when making future decisions.

"Past feeding events are embedded in the hierarchy of tube diameters, specifically in the arrangement of thick and thin tubes in the network," says Mirna Kramar, first author of the study. 

via Max Planck Institute for Dynamics and Self-Organization and Technical University of Munich: Mirna Kramar et al. Encoding memory in tube diameter hierarchy of living flow network, Proceedings of the National Academy of Sciences (2021). DOI: 10.1073/pnas.2007815118


Thinking without a brain - Studies in brainless slime molds reveal that they use physical cues to decide where to grow
Jul 2021, phys.org

Physarum polycephalum uses its body to sense mechanical cues in its surrounding environment, and performs computations similar to what we call "thinking".

via Wyss Institute at Harvard University and the Allen Discovery Center at Tufts University: Advanced Materials (2021). DOI: 10.1002/adma.202008161

Thursday, July 1, 2021

Shoots Lasers

A disposable living laser printed on chip for drug screening
Mar 2021, phys.org

Sounds to me like a 3-D printed, engineered bacteria that shoots lasers:
disposable living laser on chip by encapsulating living bacteria inside. Strong laser emissions generated from bacteria inside the droplet will be dramatically enhanced during drug interactions.

The tiny lasers serve as a highly sensitive culture-free sensor

can be directly printed from an office inkjet printer

via Nanyang Technological University: Xuerui Gong et al. Imaging-Based Optofluidic Biolaser Array Encapsulated with Dynamic Living Organisms, Analytical Chemistry (2021). DOI: 10.1021/acs.analchem.1c00020
Image credit: Quantum Causal Loop - NeoLeo

Brains At Work - The Regulation of Neuromorphic Swarming

Making this speculation about the confluence of AI, mental health, work from home, and workers rights.

Image credit: 3D Crab Nebula - Thomas Martin, Danny Milisavljevic and Laurent Drissen

Today, under OSHA, employers are required to maintain a safe and healthy workplace. Whether you're in an organized union or not, if you're a worker, you have rights. Our economy says that you will trade work for money, but you're not supposed to be trading years of your life from unsafe or unhealthy working conditions. Employers therefore have to try not to expose you to vaporized metals or cancer-causing chemicals while you work. But what if you work from home? And what if your job's mental stress is doing more damage than a couple parts per million of cancer gas?

Everyone is thinking about workers rights; you can ask Amazon about that. But workers rights traditionally only protect you while you're at work. A whole lot of people are now working, but not at work. Who protects them? What obligation does an employer have to ensure safe working conditions for you if you're not at work? Should an employer be responsible for the working conditions of your house? Sounds crazy right?
Larry Goeb - Mirrored Plasma 2 - lgflickr1
Not so fast. Somebody else is entering the chat. It's the healthy buildings movement. You could say it's the sustainability movement, turned inward (finally), and realizing that the most important thing about a building is the user. Advocates for the healthy building movement are pitching their vision to the business community, with a very simple argument -- it affects your bottom line. 

The sustainability movement in buildings was pitched as a way to save money on energy costs. The healthy building movement doesn't really care about that. In fact, we're about to flush our buildings with so much fresh air, we'll be taking out loans to pay our renewable energy credit stock portfolio managers. 

The healthy building movement is in direct opposition to the sustainability movement (as understood by the general public to mean energy efficiency and not much else, maybe more daylighting, maybe an extra bike rack). It wasn't always this way, and it doesn't have to be, but it goes like this -- use less energy by adding "intelligence" to the thermal conditioning systems. This ends up reducing the amount of overall fresh air entering the building. When you don't have to heat or cool as much outside air, you save. 

The problem is the people. Yes, we live on the planet, and burning through less energy by not "wasting" as much energy is good for all of us. But we do spend 90% of our time indoors, and that air is almost always going to be worse than outdoors. We need to focus on the indoor air as much as the outdoor air, after all, they're both rising in carbon dioxide.

Which brings us to the center of the business argument for healthy buildings. More fresh air, and better filtered air, make people less likely to get sick, which means less time off-task. On an annual basis, multiplied times all employees, you lose money in the form of productivity for having sick employees. And we know this can be reduced by changing their work environment. We even know that the relatively benign gas carbon dioxide can diminish executive function at elevated concentrations. Filters can't trap carbon dioxide. The only way to get that out is to dilute the indoor air with outdoor air (which itself may have to be filtered). 

The question is this -- how much does it cost to add the extra air to the building, and how much would I gain in the form of productivity from my employees? For most cases, it's a no-brainer. Healthy Buildings by Joe Allen and John Macomber details the numbers. 

Investing in the health, and thus the productivity, of workers via their work environment is going to radically transform the workplace. But the thing is, the workplace is diffusing into a thousand bedrooms and kitchens and backrooms splattered across the map. The workplace becomes anywhere you are. 
The Wave at Ofelia Plads - Bo Hvidt - 2017
This collapses the business case for healthy buildings. But then, at the same time, we have the continued rise of AI-mediated work and the continued recognition of mental health as important. And the next thing you know, OSHA starts citing DSM-5, and we're giving neurorights to algorithms.

But on a more serious note, and before you know it, not only will we be working from home more, we'll be working from an interconnected global super network of neuromorphic robots, using non-invasive optogenetic neural implants combined with pervasive chemosensors that monitor and adjust our cognitive operations, and help us to synchronize with each other and with our semibotic (i.e., semi-biological) digital assistants. 

We're going to need some rights for that. 

And now, partially-related series of articles about neuromorphic computing:

'This is not science fiction,' say scientists pushing for 'neuro-rights'
Dec 2020, Reuters
"Scientific advances from deep brain stimulation to wearable scanners are making manipulation of the human mind increasingly possible, creating a need for laws and protections to regulate use of the new tools, top neurologists said on Thursday.

A set of “neuro-rights” should be added to the Universal Declaration of Human Rights adopted by the United Nations, said Rafael Yuste, a neuroscience professor at New York’s Columbia University and organizer of the Morningside Group of scientists and ethicists proposing such standards.

Five rights would guard the brain against abuse from new technologies - rights to identity, free will and mental privacy along with the right of equal access to brain augmentation advances and protection from algorithmic bias, the group says.

“If you can record and change neurons, you can in principle read and write the minds of people,” Yuste said during an online panel at the Web Summit, a global tech conference.

“This is not science fiction. We are doing this in lab animals successfully.”
Team develops component for neuromorphic computer
Dec 2020, phys.org

Make it stop. Neuromorphic means it uses artificial neurons to compute, you know, like how a brain does.  Also, magnetic spin waves.

via Helmholtz-Zentrum Dresden-Rossendorf: L. Körber et al, Nonlocal Stimulation of Three-Magnon Splitting in a Magnetic Vortex, Physical Review Letters (2020). DOI: 10.1103/PhysRevLett.125.207203

New study investigates photonics for artificial intelligence and neuromorphic computing
Jan 2021, phys.org

Good explanation of Photonic Neuromorphic Computing:
Professor C David Wright, from the University of Exeter's Department of Engineering, and one of the co-authors of the study explains "Clearly, a new approach is needed — one that can fuse together the core information processing tasks of computing and memory, one that can incorporate directly in hardware the ability to learn, adapt and evolve, and one that does away with energy-sapping and speed-limiting electrical interconnects."

Photonic neuromorphic computing is one such approach. Here, signals are communicated and processed using light rather than electrons, giving access to much higher bandwidths (processor speeds) and vastly reducing energy losses.

Moreover, the researchers try to make the computing hardware itself isomorphic with biological processing system (brains), by developing devices to directly mimic the basic functions of brain neurons and synapses, then connecting these together in networks that can offer fast, parallelised, adaptive processing for artificial intelligence and machine learning applications.
Researchers unleash potential of desktop PCs to run simulations of mammals' brains
Feb 2021, phys.org

Not PC master race but CPU vs GPU, that's the real fight:
Dr. James Knight and Prof Thomas Nowotny from the University of Sussex's School of Engineering and Informatics used the latest graphical processing units (GPUs) to give a single desktop PC the capacity to simulate brain models of almost unlimited size.

"This research is a game-changer for computational neuroscience and AI researchers who can now simulate brain circuits on their local workstations, but it also allows people outside academia to turn their gaming PC into a supercomputer and run large neural networks."

via University of Sussex: James C. Knight et al. Larger GPU-accelerated brain simulations with procedural connectivity, Nature Computational Science (2021). DOI: 10.1038/s43588-020-00022-7
Research team demonstrates world's fastest optical neuromorphic processor
Jan 2021, phys.org

Time to figure out the difference between CPU, GPU and TPU? TPU's were made specifically for neuromorphic neural networks.

T Djill - Networkers - 2006

The first steps toward a quantum brain
Feb 2021, phys.org
The physicists at Radboud University researched whether a piece of hardware could do the same, without the need of software. They discovered that by constructing a network of cobalt atoms on black phosphorus they were able to build a material that stores and processes information in similar ways to the brain, and, even more surprisingly, adapts itself.

via Radboud University Nijmegen: An atomic Boltzmann machine capable of self-adaption, Nature Nanotechnology (2021). DOI: 10.1038/s41565-020-00838-4
New brain-like computing device simulates human learning
Apr 2021, phys.org
Electrochemical "synaptic transistors" simultaneously process and store information just like the human brain. 

via Northwestern University:  "Mimicking associative learning using an ion-trapping non-volatile synaptic organic electrochemical transistor," Nature Communications (2021). DOI: 10.1038/s41467-021-22680-5

Storing information with light
Jan 2021, phys.org

Neuromorphic Light Hype; brains are the new computers, and light is the new electricity.

Post Script:
Signs of burnout can be detected in sweat
Feb 2021, phys.org

Wearable chemosensors for updating your employer-provided health surveillance policy. 

Post Post Script:
Implanted wireless device triggers mice to form instant bond
May 2021, phys.org

Monday, January 21, 2019

Chemical Spaghetti

3-D Printer Error aka Print Spaghetti

Just what you've always wanted - now you can convert chemical recipes into a digital code that can then be read by a chemical-computer-machine that spits out designer drugs. (Don't tell the Sacklers though.)

Producing molecules on-demand is kind of a big deal, because you can't just download recipes for chemicals. The recipe for drugs, for example like Prozac or Viagra, are kind of a secret. And although it may sound cruel, these drugs were not developed with the intent to be shared freely - they were developed for profit, and that usually means protecting their recipe. With the portent of a chemputer, the whole model of drug production would have to change.

Next - although this chemputer is a bit more complicated, we can think about it as a high-definition 3-D printer. High definition because you're controlling the printing material down to the molecular level. A related story on this tells us that the military is trying to grow its own drones. And Science is already growing its own organs, aka organoids.


Notes:
'Chemputer' promises app-controlled revolution for drug production
Nov 2018, phys.org
Lifting the lid on future military aircraft technologies
2016, BAE Systems
Lab-grown ‘mini brains’ produce electrical patterns that resemble those of premature babies
2018, Nature
Continuous Liquid Interface Production

Implosion Fabrication uses lasers to shrink manufactured objects down to nanoscale
2019, MIT

3-D printing 100 times faster with light
Jan 2019, phys.org


4-D-printed materials can be stiff as wood or soft as sponge
Mar 2019, phys.org


Other Strange Computers:
Magic Dust Supercomputer
Slime Computers
Weird Computers 
Network Address, 2013
Crystal Calculators
DNA